GENE VIEW

MOUSE GENE INFORMATION [PubMed]
Description ELMO/CED-12 domain containing 3
Synonyms RBM29; Rbed1; C330008I15Rik; ELMOD3
Chromosome 6
Genetic Map Distance 32.27 cM
RefSeq Accessions NM_001253692; NM_144917; NP_001240621; NP_659166
NCBI Entrez Gene 232089 at chr6:72515921-72548336 (mm9) / chr6:72565922-72598413 (mm10)
Ensembl Gene ENSMUSG00000056698
VEGA Gene OTTMUSG00000023557
MGI Gene MGI:2445168
Mouse Protein (2)
UniProt ID Description Length (AA) Predicted # TMs
Q91YP6 ELMO domain-containing protein 3 381 0
D3Z5B5 Uncharacterized protein 39 0
Pfam Domains ELMO_CED12
Mouse alleles (2)
Allele Name Allele Type
Elmod3tm1a(EUCOMM)Hmgu EUCOMM-projects
Elmod3tm1(KOMP)Vlcg KOMP-Regeneron-Project
Human Homolog ELMOD3 (ELMO/CED-12 domain containing 3)
Human synonyms LST3; RBED1; RBM29
Human cytoband 2p11.2
Known deafness gene DFNB88
Within mapped deafness loci No
Associated Human Disease in OMIM
None
Chicken homolog (0)
Gene Ontology
Biological Process (2) phagocytosis; biological_process
Cellular Component (2) cytoskeleton; cellular_component
Molecular Function (1) molecular_function
FACS-Sorted Hair Cells
Data | Chart
E16a
E16b
P0
P4
P7
P16
Utricle GFP+ cells
8
19
19
13
42
111
Cochlea GFP+ cells
14
22
16
26
47
NA
Utricle GFP- cells
22
4
8
17
44
0
Cochlea GFP- cells
24
19
4
27
38
NA
Analysis
Condition A
Mean A
Condition B
Mean B
Fold Change (B/A)
False Discovery Rate (FDR)
GFP-
19
GFP+
31
1.60
0.997
Utricle
26
Cochlea
24
0.93
1
Embryonic
17
Postnatal
29
1.74
1
Adult Cochlear Inner and Outer Hair Cells
Probeset ID IHC (mean ± sd) OHC (mean ± sd) [OHC replicate] Fold Change (OHC/IHC) False Discovery Rate (FDR)
17467782 24.53 ± 1.07 25.21 ± 4.43 [34.98] 1.03 0.799
Otic Progenitor Cells
Data
Growth Factor
Replicate 1
Replicate 2
Replicate 3
Mean
bFGF
335
313
256
304
No bFGF
402
412
402
364
EGF
343
331
327
334
Analysis
Condition A
Mean A
Condition B
Mean B
Fold Change (B/A)
False Discovery Rate (FDR)
bFGF
304
No bFGF
364
1.20
1
bFGF
304
EGF
334
1.10
0.588
No bFGF
364
EGF
334
0.92
0.668
Chicken Stereocilium Proteomics
No chicken homolog has been identified for Elmod3.
Auditory and Vestibular Ganglion Neurons
Probe set ID: 1436695_x_at
Age E12 E13 E16 P0 P6 P15
Spiral ganglion
Replicate 1 210.64 243.24 351.45 329.29 397.33 688.5
Replicate 1 Call P P P P P P
Replicate 2 161.36 254.15 627.18 274.11 475.91 660.73
Replicate 2 Call P P P P P P
Replicate 3 209.99 288.42 750.78 441.97 552.07 671.29
Replicate 3 Call P P P P P P
Replicate 4 669.59 384.74 550.03 662.18
Replicate 4 Call P P P P
Mean 194 261.94 599.75 357.53 493.84 670.68
Standard Deviation 28.27 23.58 173.29 72.17 73.45 12.77
Log2 Mean 7.59 8.03 9.17 8.46 8.94 9.39
Log2 Standard Deviation 0.22 0.13 0.49 0.3 0.22 0.03
 
Vestibular ganglion
Replicate 1 223.99 279.13 264.45 239.96 296.61 336.84
Replicate 1 Call P P A P A P
Replicate 2 199.31 298.79 272.1 314.57 245.35 308.45
Replicate 2 Call P P P M P P
Replicate 3 207.75 267.25 266.81 325.04 263.93 300.86
Replicate 3 Call P P A P A P
Mean 210.35 281.72 267.79 293.19 268.63 315.38
Standard Deviation 12.54 15.93 3.92 46.39 25.95 18.97
Log2 Mean 7.71 8.14 8.06 8.18 8.07 8.3
Log2 Standard Deviation 0.09 0.08 0.02 0.24 0.14 0.09
Probe set ID: 1451392_at
Age E12 E13 E16 P0 P6 P15
Spiral ganglion
Replicate 1 95.48 113.82 84.52 85.32 139.62 71.78
Replicate 1 Call P P P P P M
Replicate 2 92.53 91.09 85.51 89.99 126.77 81.69
Replicate 2 Call P P P P P A
Replicate 3 93.19 100.47 100.43 106.99 97.43 121.78
Replicate 3 Call A P P P M A
Replicate 4 154.8 112.78 99.41 151.74
Replicate 4 Call P P P P
Mean 93.73 101.79 106.32 98.77 115.81 106.75
Standard Deviation 1.55 11.42 33.13 13.19 20.77 36.97
Log2 Mean 6.55 6.66 6.69 6.62 6.84 6.67
Log2 Standard Deviation 0.02 0.16 0.41 0.19 0.26 0.5
 
Vestibular ganglion
Replicate 1 116.3 108.5 108.44 56.52 103.06 120.72
Replicate 1 Call P P M A P A
Replicate 2 103.5 87.48 86.67 84.01 102.19 49.22
Replicate 2 Call A A P A P P
Replicate 3 106.56 98.06 113.25 112.23 81.26 83.49
Replicate 3 Call P P P P P P
Mean 108.79 98.01 102.79 84.25 95.5 84.48
Standard Deviation 6.68 10.51 14.16 27.86 12.34 35.76
Log2 Mean 6.76 6.61 6.67 6.34 6.57 6.31
Log2 Standard Deviation 0.09 0.16 0.21 0.5 0.19 0.65