GENE VIEW

MOUSE GENE INFORMATION [PubMed]
Description calcium and integrin binding family member 2
Synonyms calcium binding protein Kip2; 2810434I23Rik
Chromosome 9
Genetic Map Distance 29.70 cM
RefSeq Accessions NM_019686; NP_062660
NCBI Entrez Gene 56506 at chr9:54393159-54407886 (mm9) / chr9:54545352-54560079 (mm10)
Ensembl Gene ENSMUSG00000037493
VEGA Gene OTTMUSG00000030276
MGI Gene MGI:1929293
Mouse Protein (2)
UniProt ID Description Length (AA) Predicted # TMs
Q9Z309 Calcium and integrin-binding family member 2 187 0
Q544Z8 Calcium and integrin binding family member 2 187 0
Pfam Domains efhand; efhand; efhand
Mouse alleles (3)
Allele Name Allele Type
Cib2tm1a(EUCOMM)Wtsi EUCOMM-projects
Cib2tm1e(EUCOMM)Wtsi EUCOMM-projects
Cib2tm1(KOMP)Vlcg KOMP-Regeneron-Project
Human Homolog CIB2 (calcium and integrin binding family member 2)
Human synonyms KIP2
Human cytoband 15q24
Known deafness gene DFNB48/USH1J
Within mapped deafness loci DFNB48; USH3L
Associated Human Disease in OMIM
None
Chicken homolog (1)
ENSGALG00000003312 (CIB2) encoding ENSGALP00000005238
Gene Ontology
Biological Process (1) integrin-mediated signaling pathway
Molecular Function (1) calcium ion binding
FACS-Sorted Hair Cells
Data | Chart
E16a
E16b
P0
P4
P7
P16
Utricle GFP+ cells
550
106
220
482
604
156
Cochlea GFP+ cells
93
44
460
1755
2115
NA
Utricle GFP- cells
17
8
4
23
15
0
Cochlea GFP- cells
16
1
6
14
6
NA
Analysis
Condition A
Mean A
Condition B
Mean B
Fold Change (B/A)
False Discovery Rate (FDR)
GFP-
10
GFP+
599
57.16
2.38e-11
Utricle
182
Cochlea
451
2.47
0.87
Embryonic
104
Postnatal
419
3.99
0.00177
Adult Cochlear Inner and Outer Hair Cells
Probeset ID IHC (mean ± sd) OHC (mean ± sd) [OHC replicate] Fold Change (OHC/IHC) False Discovery Rate (FDR)
17527261 342.39 ± 20.06 303.04 ± 35.36 [367.87] 0.89 0.511
Otic Progenitor Cells
Data
Growth Factor
Replicate 1
Replicate 2
Replicate 3
Mean
bFGF
189
222
183
150
No bFGF
203
205
186
188
EGF
202
166
154
174
Analysis
Condition A
Mean A
Condition B
Mean B
Fold Change (B/A)
False Discovery Rate (FDR)
bFGF
150
No bFGF
188
1.25
1
bFGF
150
EGF
174
1.16
0.457
No bFGF
188
EGF
174
0.93
0.764
Chicken Stereocilium Proteomics
The chicken protein was not reproducibly detected in the chicken stereocilia.
Auditory and Vestibular Ganglion Neurons
Probe set ID: 1422852_at
Age E12 E13 E16 P0 P6 P15
Spiral ganglion
Replicate 1 1158.5 277.21 1509.82 1262.19 890.08 438.19
Replicate 1 Call P A P P P A
Replicate 2 1307.1 278.22 1109.26 587.55 1058.64 599.52
Replicate 2 Call P A P M P A
Replicate 3 1373.18 408.22 2066.77 1150.56 869.99 1022.08
Replicate 3 Call P P P P P M
Replicate 4 826.12 1219.52 718.39 768.96
Replicate 4 Call A P A A
Mean 1279.59 321.22 1377.99 1054.96 884.28 707.19
Standard Deviation 109.95 75.35 538.07 314.98 139.23 249.62
Log2 Mean 10.32 8.3 10.34 9.98 9.77 9.4
Log2 Standard Deviation 0.13 0.32 0.57 0.52 0.23 0.52
 
Vestibular ganglion
Replicate 1 668.88 476.67 319.08 466.56 420.53 875.06
Replicate 1 Call P P A A A A
Replicate 2 768.76 573.17 382.9 357.54 458.25 1062.59
Replicate 2 Call P P A A A A
Replicate 3 702.9 512 313.31 435.73 378.15 888.51
Replicate 3 Call P P A A A P
Mean 713.51 520.61 338.43 419.94 418.98 942.05
Standard Deviation 50.78 48.82 38.62 56.2 40.07 104.6
Log2 Mean 9.48 9.02 8.4 8.71 8.71 9.87
Log2 Standard Deviation 0.1 0.13 0.16 0.2 0.14 0.16
Probe set ID: 1447770_at
Age E12 E13 E16 P0 P6 P15
Spiral ganglion
Replicate 1 45.8 24.42 27.13 31.07 6.84 37.71
Replicate 1 Call A A A A A A
Replicate 2 27.36 26.95 18.93 27.71 17.32 41.76
Replicate 2 Call A A A A A A
Replicate 3 27.61 33.73 24.16 22.59 27.7 13.8
Replicate 3 Call A A A A A A
Replicate 4 12.04 8.1 19.87 44.96
Replicate 4 Call A A A A
Mean 33.59 28.37 20.57 22.37 17.93 34.56
Standard Deviation 10.57 4.81 6.62 10.13 8.61 14.15
Log2 Mean 5.03 4.81 4.3 4.32 4 4.97
Log2 Standard Deviation 0.43 0.24 0.52 0.89 0.86 0.8
 
Vestibular ganglion
Replicate 1 24.67 10.19 26.27 27.52 53.99 34.78
Replicate 1 Call A A A A A A
Replicate 2 34.73 15.1 22.86 36.26 42.03 37.35
Replicate 2 Call A A A A A A
Replicate 3 20 5.27 32.68 36.32 50.17 23.66
Replicate 3 Call A A A A A A
Mean 26.47 10.19 27.27 33.37 48.73 31.93
Standard Deviation 7.53 4.92 4.99 5.06 6.11 7.28
Log2 Mean 4.69 3.22 4.75 5.05 5.6 4.97
Log2 Standard Deviation 0.4 0.77 0.26 0.23 0.19 0.35
Probe set ID: 1459833_x_at
Age E12 E13 E16 P0 P6 P15
Spiral ganglion
Replicate 1 29.74 26.54 29.94 35.17 46.05 23.01
Replicate 1 Call A A A A A A
Replicate 2 38.2 23.41 23.11 23.42 26.21 21.14
Replicate 2 Call A A A A A A
Replicate 3 42.2 22.9 24.18 35.28 28.53 26.49
Replicate 3 Call A A A A A A
Replicate 4 22.22 31.16 14.84 31.27
Replicate 4 Call A A A A
Mean 36.71 24.28 24.86 31.26 28.91 25.48
Standard Deviation 6.36 1.97 3.48 5.57 12.9 4.45
Log2 Mean 5.18 4.6 4.63 4.95 4.74 4.66
Log2 Standard Deviation 0.26 0.11 0.19 0.28 0.67 0.25
 
Vestibular ganglion
Replicate 1 43.5 14.83 18.67 17.95 47.1 19.99
Replicate 1 Call A A A A A A
Replicate 2 49.03 3.68 11.17 26.98 31.91 57.8
Replicate 2 Call A A A A A A
Replicate 3 23.97 12.01 22.44 15.51 44.6 39.64
Replicate 3 Call A A A A A A
Mean 38.83 10.17 17.43 20.15 41.2 39.14
Standard Deviation 13.17 5.8 5.74 6.04 8.14 18.91
Log2 Mean 5.21 3.12 4.06 4.29 5.34 5.16
Log2 Standard Deviation 0.55 1.08 0.52 0.41 0.3 0.78