GENE VIEW

MOUSE GENE INFORMATION [PubMed]
Description centrosomal protein 78
Synonyms 5730599I05Rik
Chromosome 19
Genetic Map Distance 10.89 cM
RefSeq Accessions NM_198019; NP_932136
NCBI Entrez Gene 208518 at chr19:16030263-16059479 (mm9) / chr19:15955768-15985016 (mm10)
Ensembl Gene ENSMUSG00000041491
VEGA Gene
MGI Gene MGI:1924386
Mouse Protein (2)
UniProt ID Description Length (AA) Predicted # TMs
Q6IRU7 Centrosomal protein of 78 kDa 790 0
Q8K0Y4 Cep78 protein 237 0
Pfam Domains Pfam-B_15087; V_ATPase_I; Pfam-B_4788
Mouse alleles (2)
Allele Name Allele Type
Cep78tm1e(EUCOMM)Hmgu EUCOMM-projects
Cep78tm1a(EUCOMM)Hmgu EUCOMM-projects
Human Homolog CEP78 (centrosomal protein 78kDa)
Human synonyms C9orf81; IP63
Human cytoband 9q21.2
Known deafness gene No
Within mapped deafness loci No
Associated Human Disease in OMIM
None
Chicken homolog (1)
ENSGALG00000015179 (CEP78) encoding ENSGALP00000024448
Gene Ontology
Biological Process (1) biological_process
Cellular Component (3) centrosome; cytoplasm; cytoskeleton
Molecular Function (1) molecular_function
FACS-Sorted Hair Cells
Data | Chart
E16a
E16b
P0
P4
P7
P16
Utricle GFP+ cells
1678
36
6
13
20
45
Cochlea GFP+ cells
61
65
59
48
14
NA
Utricle GFP- cells
68
35
20
21
15
94
Cochlea GFP- cells
42
42
25
29
14
NA
Analysis
Condition A
Mean A
Condition B
Mean B
Fold Change (B/A)
False Discovery Rate (FDR)
GFP-
37
GFP+
186
4.99
0.445
Utricle
171
Cochlea
40
0.24
1
Embryonic
253
Postnatal
30
0.12
0.765
Adult Cochlear Inner and Outer Hair Cells
Probeset ID IHC (mean ± sd) OHC (mean ± sd) [OHC replicate] Fold Change (OHC/IHC) False Discovery Rate (FDR)
17363220 11.69 ± 1.94 9.51 ± 1.91 [10.32] 0.81 0.592
Otic Progenitor Cells
Data
Growth Factor
Replicate 1
Replicate 2
Replicate 3
Mean
bFGF
545
481
494
463
No bFGF
513
469
438
536
EGF
761
840
834
812
Analysis
Condition A
Mean A
Condition B
Mean B
Fold Change (B/A)
False Discovery Rate (FDR)
bFGF
463
No bFGF
536
1.16
1
bFGF
463
EGF
812
1.75
8.83e-6
No bFGF
536
EGF
812
1.51
0.00085
Chicken Stereocilium Proteomics
The chicken protein was not reproducibly detected in the chicken stereocilia.
Auditory and Vestibular Ganglion Neurons
Probe set ID: 1436352_at
Age E12 E13 E16 P0 P6 P15
Spiral ganglion
Replicate 1 1404.54 983.17 1407.73 1145.24 358.11 383.62
Replicate 1 Call A P P M A A
Replicate 2 1417.59 1092.14 1726.37 665.01 535.76 481
Replicate 2 Call P P P A M A
Replicate 3 1440.62 1225.76 1428.22 1227.09 422.37 287.47
Replicate 3 Call P P P P A A
Replicate 4 1558.36 1143.33 698.88 373.82
Replicate 4 Call P P A A
Mean 1420.92 1100.36 1530.17 1045.17 503.78 381.48
Standard Deviation 18.27 121.5 146.83 256.43 149.37 79.17
Log2 Mean 10.47 10.1 10.57 9.99 8.93 8.55
Log2 Standard Deviation 0.02 0.16 0.14 0.41 0.42 0.3
 
Vestibular ganglion
Replicate 1 1036.75 943.52 646.19 546.23 491.18 357.81
Replicate 1 Call A P A A A P
Replicate 2 1040.03 958.55 741.68 680.54 616.44 358.36
Replicate 2 Call A A A A A P
Replicate 3 1032.48 1055.13 707.3 646.34 574.27 367.38
Replicate 3 Call P P A A A A
Mean 1036.42 985.73 698.39 624.37 560.63 361.18
Standard Deviation 3.79 60.57 48.36 69.8 63.73 5.37
Log2 Mean 10.02 9.94 9.45 9.28 9.12 8.5
Log2 Standard Deviation 0.01 0.09 0.1 0.17 0.17 0.02