GENE VIEW

MOUSE GENE INFORMATION [PubMed]
Description actin, gamma, cytoplasmic 1
Synonyms Actl; E51
Chromosome 11
Genetic Map Distance 84.07 cM
RefSeq Accessions NM_009609; NP_033739
NCBI Entrez Gene 11465 at chr11:120207004-120209798 (mm9) / chr11:120345690-120348484 (mm10)
Ensembl Gene ENSMUSG00000062825
VEGA Gene OTTMUSG00000004137
MGI Gene MGI:87906
Mouse Protein (7)
UniProt ID Description Length (AA) Predicted # TMs
P63260 Actin, cytoplasmic 2 375 0
B1ATY0 Actin, gamma, cytoplasmic 1 295 0
B1ATY1 Actin, gamma, cytoplasmic 1 153 0
Q3TSB7 Putative uncharacterized protein 375 0
Q3UD81 Putative uncharacterized protein (Fragment) 235 0
Q4KL81 Actin, gamma, cytoplasmic 1 375 0
Q9QZ83 Gamma actin-like protein 393 0
Pfam Domains
Mouse alleles (4)
Allele Name Allele Type
Actg1tm1(KOMP)Vlcg KOMP-Regeneron-Project
Actg1tm1.1Erv Targeted (knock-out)
Actg1tm1.2Erv Targeted (Floxed/Frt)
Actg1tm1Erv Targeted (Floxed/Frt)
Human Homolog ACTG1 (actin, gamma 1)
Human synonyms ACT; ACTG; DFNA20; DFNA26
Human cytoband 17q25
Known deafness gene DFNA20/26
Within mapped deafness loci No
Associated Human Disease in OMIM
Chicken homolog (1)
ENSGALG00000009621 (ACTG1) encoding ENSGALP00000015657
Gene Ontology
Biological Process (1) sarcomere organization
Cellular Component (7) costamere; filamentous actin; filamentous actin; cytoplasm; cytoskeleton; actin cytoskeleton; myofibril
Molecular Function (6) protein binding; identical protein binding; ATP binding; ATP binding; nucleotide binding; structural constituent of cytoskeleton
FACS-Sorted Hair Cells
Data | Chart
E16a
E16b
P0
P4
P7
P16
Utricle GFP+ cells
28788
7610
13834
21629
16758
8798
Cochlea GFP+ cells
33384
13375
18427
24038
21240
NA
Utricle GFP- cells
15290
9489
9365
22165
11106
5837
Cochlea GFP- cells
19419
6075
7884
11821
18519
NA
Analysis
Condition A
Mean A
Condition B
Mean B
Fold Change (B/A)
False Discovery Rate (FDR)
GFP-
12452
GFP+
18898
1.52
0.807
Utricle
14222
Cochlea
17418
1.22
1
Embryonic
16679
Postnatal
15102
0.91
1
Adult Cochlear Inner and Outer Hair Cells
Probeset ID IHC (mean ± sd) OHC (mean ± sd) [OHC replicate] Fold Change (OHC/IHC) False Discovery Rate (FDR)
17273061 23.57 ± 2.06 30.03 ± 5.54 [41.40] 1.27 0.501
17547608 785.58 ± 26.86 511.65 ± 165.44 [770.77] 0.65 0.501
Otic Progenitor Cells
Data
Growth Factor
Replicate 1
Replicate 2
Replicate 3
Mean
bFGF
18486
17842
19726
31367
No bFGF
17461
18569
19440
26731
EGF
33659
31803
35729
33730
Analysis
Condition A
Mean A
Condition B
Mean B
Fold Change (B/A)
False Discovery Rate (FDR)
bFGF
31367
No bFGF
26731
0.85
1
bFGF
31367
EGF
33730
1.08
0.579
No bFGF
26731
EGF
33730
1.26
0.0464
Chicken Stereocilium Proteomics
Protein ID ENSGALP00000015657
Symbol ACTB
Description Actin, beta
log10 riBAQ in stereocilia (mean ± sd) -0.57 ± 0.05
log10 riBAQ in utricle (mean ± sd) -1.41 ± 0.06
Molecules per stereocilium (mean ± error with slope error) 400000.00 ± 34094.75
Corrected Molecules per stereocilium (mean ± sd) 400000.11 ± 48441.88
Stereocilium / Utricle ratio (mean ± sd) 6.98 ± 0.70
Enriched in the stereocilia (FDR < 0.05) TRUE
Auditory and Vestibular Ganglion Neurons
Probe set ID: 1415779_s_at
Age E12 E13 E16 P0 P6 P15
Spiral ganglion
Replicate 1 9072.26 7152.07 8623.41 8666.51 7013.63 7445.72
Replicate 1 Call P P P P P P
Replicate 2 9249.56 8501.51 7073.37 8169.16 8360.07 5880.46
Replicate 2 Call P P P P P P
Replicate 3 9632.8 8944.46 7713.59 8440.1 7125.98 6550
Replicate 3 Call P P P P P P
Replicate 4 6528.09 8465.12 7110.55 6458.97
Replicate 4 Call P P P P
Mean 9318.21 8199.35 7484.62 8435.22 7402.56 6583.79
Standard Deviation 286.51 933.62 900.62 204.29 640.28 646.61
Log2 Mean 13.19 12.99 12.86 13.04 12.85 12.68
Log2 Standard Deviation 0.04 0.17 0.17 0.04 0.12 0.14
 
Vestibular ganglion
Replicate 1 9574.74 9270.31 7647.68 7853.5 5717.23 6364.92
Replicate 1 Call P P P P P P
Replicate 2 9053.57 9007.86 7478.37 6906.47 7419.28 6089.59
Replicate 2 Call P P P P P P
Replicate 3 9471.67 8959.77 6386.76 7194.38 7246.37 6294.09
Replicate 3 Call P P P P P P
Mean 9366.66 9079.31 7170.94 7318.12 6794.29 6249.53
Standard Deviation 276 167.15 684.37 485.49 936.76 142.97
Log2 Mean 13.19 13.15 12.8 12.84 12.72 12.61
Log2 Standard Deviation 0.04 0.03 0.14 0.09 0.21 0.03