GENE VIEW

MOUSE GENE INFORMATION [PubMed]
Description actin, beta
Synonyms E430023M04Rik; Actx; beta-actin; A-X actin-like protein
Chromosome 5
Genetic Map Distance 81.80 cM
RefSeq Accessions NM_007393; NP_031419
NCBI Entrez Gene 11461 at chr5:143664795-143668403 (mm9) / chr5:142903116-142906724 (mm10)
Ensembl Gene ENSMUSG00000029580
VEGA Gene OTTMUSG00000035960
MGI Gene MGI:87904
Mouse Protein (19)
UniProt ID Description Length (AA) Predicted # TMs
P60710 Actin, cytoplasmic 1 375 0
A1E281 Beta-actin (Fragment) 121 0
B2RRX1 Actin, beta 375 0
O89054 Cytoskeletal beta-actin (Fragment) 136 0
Q3TIJ9 Putative uncharacterized protein 375 0
Q3U5R4 Putative uncharacterized protein 375 0
Q3U804 Putative uncharacterized protein 374 0
Q3U939 Putative uncharacterized protein 374 0
Q3UA89 Putative uncharacterized protein 375 0
Q3UAA9 Putative uncharacterized protein 375 0
Q3UAF6 Putative uncharacterized protein 375 0
Q3UAF7 Putative uncharacterized protein 375 0
Q3UBP6 Putative uncharacterized protein 375 0
Q3UBQ4 Putative uncharacterized protein 374 0
Q3UCF8 Putative uncharacterized protein 374 0
Q3UGS0 Putative uncharacterized protein 375 0
Q61276 A-X actin 375 0
Q6IWE2 Beta-actin (Fragment) 77 0
Q99NC5 Beta-actin FE-3 (Fragment) 134 0
Pfam Domains
Mouse alleles (14)
Allele Name Allele Type
Actbtm1a(EUCOMM)Hmgu EUCOMM-projects
Actbtm1e(EUCOMM)Hmgu EUCOMM-projects
Actbtm1(NCOM)Mfgc NorCOMM-projects
Actbtm1(INSR)Dac Targeted (Floxed/Frt)
Actbtm1(PyVT)Arge Targeted (knock-in)
Actbtm1(Tag)Arge Targeted (knock-in)
Actbtm1.1Erv Targeted (Floxed/Frt)
Actbtm1Alj Targeted (Reporter)
Actbtm1Bhr Targeted (knock-out)
Actbtm1Dost Targeted (Reporter)
Actbtm1Npa Targeted (knock-in)
Actbtm2.1Npa Targeted (Reporter)
Actbtm2Npa Targeted (Floxed/Frt)
Actbtm3.1(Sirt1)Npa Targeted (knock-in)
Human Homolog ACTB (actin, beta)
Human synonyms PS1TP5BP1
Human cytoband 7p22
Known deafness gene No
Within mapped deafness loci No
Associated Human Disease in OMIM
Chicken homolog (0)
Gene Ontology
Biological Process (1) axonogenesis
Cellular Component (11) cytoplasm; soluble fraction; ribonucleoprotein complex; cytoskeleton; axon; NuA4 histone acetyltransferase complex; MLL5-L complex; cytosol; cytosol; protein complex; cortical cytoskeleton
Molecular Function (7) kinesin binding; Tat protein binding; nitric-oxide synthase binding; nucleotide binding; protein kinase binding; ATP binding; ATP binding
FACS-Sorted Hair Cells
Data | Chart
E16a
E16b
P0
P4
P7
P16
Utricle GFP+ cells
185952
217804
170510
254760
200702
106614
Cochlea GFP+ cells
668951
251002
347159
206496
127002
NA
Utricle GFP- cells
469943
244666
261724
445287
316226
255840
Cochlea GFP- cells
332867
241681
241058
317151
356770
NA
Analysis
Condition A
Mean A
Condition B
Mean B
Fold Change (B/A)
False Discovery Rate (FDR)
GFP-
316656
GFP+
248814
0.79
0.969
Utricle
260836
Cochlea
309014
1.18
1
Embryonic
326608
Postnatal
257664
0.79
0.622
Adult Cochlear Inner and Outer Hair Cells
Probeset ID IHC (mean ± sd) OHC (mean ± sd) [OHC replicate] Fold Change (OHC/IHC) False Discovery Rate (FDR)
17454753 109.63 ± 5.60 66.03 ± 16.47 [69.85] 0.60 0.501
Otic Progenitor Cells
Data
Growth Factor
Replicate 1
Replicate 2
Replicate 3
Mean
bFGF
19923
18938
21961
24893
No bFGF
15665
16977
18262
20517
EGF
32509
29382
34229
32040
Analysis
Condition A
Mean A
Condition B
Mean B
Fold Change (B/A)
False Discovery Rate (FDR)
bFGF
24893
No bFGF
20517
0.82
1
bFGF
24893
EGF
32040
1.29
0.0213
No bFGF
20517
EGF
32040
1.56
2.68e-5
Chicken Stereocilium Proteomics
No chicken homolog has been identified for Actb.
Auditory and Vestibular Ganglion Neurons
Probe set ID: 1419734_at
Age E12 E13 E16 P0 P6 P15
Spiral ganglion
Replicate 1 3442.85 3628.33 2610.92 4195.65 5255.4 5693.6
Replicate 1 Call P P P P P P
Replicate 2 3639.28 3558.3 3268.52 3333.61 4035.91 6106.94
Replicate 2 Call P P P P P P
Replicate 3 3721.6 3420.85 3434.13 3849.3 4631.29 5342.5
Replicate 3 Call P P P P P P
Replicate 4 5031.91 3605.06 3376.89 5202.58
Replicate 4 Call P P P P
Mean 3601.24 3535.83 3586.37 3745.91 4324.87 5586.41
Standard Deviation 143.21 105.55 1027.18 366.42 804.56 403.84
Log2 Mean 11.81 11.79 11.77 11.87 12.06 12.44
Log2 Standard Deviation 0.06 0.04 0.39 0.14 0.27 0.1
 
Vestibular ganglion
Replicate 1 3732.02 3144.61 2379.99 2249.8 1817.31 2410.66
Replicate 1 Call P P P P P P
Replicate 2 3531.64 2838.96 2680.36 2437.22 2420.18 2378.54
Replicate 2 Call P P P P P P
Replicate 3 3604.41 2978.38 2081.12 2450.58 2630.76 2456.04
Replicate 3 Call P P P P P P
Mean 3622.69 2987.32 2380.49 2379.2 2289.42 2415.08
Standard Deviation 101.43 153.02 299.62 112.26 422.2 38.94
Log2 Mean 11.82 11.54 11.21 11.22 11.14 11.24
Log2 Standard Deviation 0.04 0.07 0.18 0.07 0.28 0.02
Probe set ID: 1436722_a_at
Age E12 E13 E16 P0 P6 P15
Spiral ganglion
Replicate 1 6539.28 3197.09 5977.48 5385.24 5772.49 6943.3
Replicate 1 Call P P P P P P
Replicate 2 6473.73 4627.26 5793.73 6679.04 7041.32 4506.28
Replicate 2 Call P P P P P P
Replicate 3 6653.51 5010.02 6189.45 5299.13 5227.74 5233.26
Replicate 3 Call P P P P P P
Replicate 4 6442.82 4563 5754.04 5433.53
Replicate 4 Call P P P P
Mean 6555.51 4278.12 6100.87 5481.6 5948.9 5529.09
Standard Deviation 90.98 955.56 279.49 879.44 770.83 1023.52
Log2 Mean 12.68 12.04 12.57 12.41 12.53 12.42
Log2 Standard Deviation 0.02 0.35 0.07 0.23 0.18 0.26
 
Vestibular ganglion
Replicate 1 6235.57 5262.59 4311.79 2467.31 1639.43 3379.02
Replicate 1 Call P P P P P P
Replicate 2 6455.03 5544.93 4112.02 2598.13 3569.56 2992.07
Replicate 2 Call P P P P P P
Replicate 3 6472.28 5072.83 1855.67 3341.94 2827.18 2826.35
Replicate 3 Call P P P P P P
Mean 6387.63 5293.45 3426.49 2802.46 2678.72 3065.81
Standard Deviation 131.97 237.56 1364.03 471.76 973.59 283.62
Log2 Mean 12.64 12.37 11.65 11.44 11.32 11.58
Log2 Standard Deviation 0.03 0.06 0.68 0.23 0.58 0.13